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Intron Name: Anas_platyrhynchos_platyrhynchos_3_34404850_34407497_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34404850 - 34407497

Intron Length:

2648

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGAAC

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTGAATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAA

U12 Branch Point Sequence:

TTCTCCTGAATT

Flanking Amino Acid:

HIQATKPDTAGCGLNDSPVG

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

74.9

34.9

Major BPS

69.6

0.49

59.5

Major PPT

63.1

0.29

63.2

37.3

Minor 5ss

32.6

-2

3.1

42.6

44.5

Minor BPS

77.3

0.93

1.3

88.83

36.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016336

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025764

34398573 - 34409195

10623

ENSAPLT00000017047

34399504 - 34409195

9692