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Intron Name: Anas_platyrhynchos_platyrhynchos_3_34407914_34408893_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34407914 - 34408893

Intron Length:

980

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGAAG

5'SS Class:

major

3'SS Sequence:

AACATCTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ACTTTTTTAAAA

Flanking Amino Acid:

SRDPSLSDNTRFGVYVPAGI

Intron Amino Acid Position:

412

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

71.5

39.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

70.1

0.45

0.9

66.5

39.6

Minor 5ss

31.7

-2.1

3.1

39.3

46.2

Minor BPS

66.2

0.5

1.3

70.15

36.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016336

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025764

34398573 - 34409195

10623

ENSAPLT00000017047

34399504 - 34409195

9692