Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_34433190_34433265_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34433190 - 34433265

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGTGCC

5'SS Class:

major

3'SS Sequence:

CGTTGCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCGCGAT

U12 Branch Point Sequence:

CCATGCCCACCC

Flanking Amino Acid:

VVQYNKWQGGGIIAVSYEAR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.1

68.7

37.6

Major BPS

48.4

-0.1

1.5

46.1

46.9

Major PPT

76.9

0.61

0.9

69.4

36.8

Minor 5ss

32.1

-2

3.3

35.7

41.2

Minor BPS

36.8

-1

2.2

43.64

43.9

Associated Gene:

Gene:

POLH

Ensembl Gene ID:

ENSAPLG00000001092

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001149

34426110 - 34433402

7293