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Intron Name: Anas_platyrhynchos_platyrhynchos_3_34433766_34434170_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
34433766 - 34434170

Intron Length:
405

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACGCGGG

5'SS Class:
major

3'SS Sequence:
TGTCCCTGAGCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GCCGCAT

U12 Branch Point Sequence:
TGTCCCTGAGCA

Flanking Amino Acid:
TQRYRLEALKFCEEFKEKCP

Intron Amino Acid Position:
36

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.8
0.63
1.1
58.2
46.8

Major BPS
45.9
-0.2
1.5
53.3
44.2

Major PPT
66.6
0.37
1
62.6
38.4

Minor 5ss
34.7
-1.7
3.5
46.9
48.5

Minor BPS
58.1
0.25
1.7
71.35
40

Associated Gene:

Gene:
XPO5

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

34433661 - 34456945
23285

34433661 - 34456945
23285