Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_34443366_34444309_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34443366 - 34444309

Intron Length:

944

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTATGTGTA

5'SS Class:

major

3'SS Sequence:

CCTGTTCCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTTCTTTCCT

Flanking Amino Acid:

SQMFRTLDKDEIPVNDGIDL

Intron Amino Acid Position:

520

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.3

74.1

36.6

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

75.1

0.57

0.8

69.6

31.2

Minor 5ss

43.7

-0.7

3.1

56.4

Minor BPS

47.9

-0

3.6

87.49

38.1

Associated Gene:

Gene:

XPO5

Ensembl Gene ID:

ENSAPLG00000001469

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040854

34433661 - 34456945

23285

ENSAPLT00000002022

34433661 - 34456945

23285