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Intron Name: Anas_platyrhynchos_platyrhynchos_3_34461461_34461633_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34461461 - 34461633

Intron Length:

173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTACTTTCT

5'SS Class:

major

3'SS Sequence:

TTTTCCCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATCCAT

U12 Branch Point Sequence:

TCTGCTGCAGGT

Flanking Amino Acid:

PGVIEIQNIKGKKVARVANA

Intron Amino Acid Position:

269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.6

0.42

1.1

65.4

41.2

Major BPS

57.2

0.18

1.3

68.1

Major PPT

91.3

0.93

0.6

89.3

19.5

Minor 5ss

41.4

-1

45.4

Minor BPS

36.5

-0.9

2.4

54.98

47.4

Associated Gene:

Gene:

POLR1C

Ensembl Gene ID:

ENSAPLG00000002908

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002963

34460851 - 34463522

2672