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Intron Name: Anas_platyrhynchos_platyrhynchos_3_34462696_34463075_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34462696 - 34463075

Intron Length:

380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGCTA

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTCCTTGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTCAA

U12 Branch Point Sequence:

GTTAAGTCAACC

Flanking Amino Acid:

NAFRRILLAEVPTMAVEKVF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.6

42.7

Major BPS

0.23

1.1

61.4

36.2

Major PPT

0.27

1.7

74.1

36.6

Minor 5ss

32.9

-1.9

3.6

46.5

48.8

Minor BPS

44.9

-0.4

2.3

61.67

42.9

Associated Gene:

Gene:

POLR1C

Ensembl Gene ID:

ENSAPLG00000002908

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002963

34460851 - 34463522

2672