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Intron Name: Anas_platyrhynchos_platyrhynchos_3_34463184_34463290_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34463184 - 34463290

Intron Length:

107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGCAGA

5'SS Class:

major

3'SS Sequence:

TTCCCTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAT

U12 Branch Point Sequence:

CCGTCCCCATTC

Flanking Amino Acid:

DAWDQQRFEEEFRVDVVGEE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

42.7

Major BPS

66.1

0.4

1.3

57.1

49.4

Major PPT

79.9

0.67

0.7

72.6

32.1

Minor 5ss

31.9

-2.1

3.1

39.5

46.1

Minor BPS

41.4

-0.6

46.65

Associated Gene:

Gene:

POLR1C

Ensembl Gene ID:

ENSAPLG00000002908

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002963

34460851 - 34463522

2672