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Intron Name: Anas_platyrhynchos_platyrhynchos_3_34535581_34535796_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34535581 - 34535796

Intron Length:

216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGAGC

5'SS Class:

strong_major

3'SS Sequence:

TTGCCTGTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTGTAT

U12 Branch Point Sequence:

GGGGCTGTATCC

Flanking Amino Acid:

RIALARAVYQEKELYLLDDP

Intron Amino Acid Position:

803

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

70.2

40.3

Major BPS

46.5

-0.2

1.5

45.3

47.5

Major PPT

74.9

0.56

0.9

72.6

37.5

Minor 5ss

-2.1

3.2

44.2

Minor BPS

-0.7

2.2

47.01

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003561

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021181

34529670 - 34543299

13630

ENSAPLT00000003667

34529670 - 34541851

12182