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Intron Name: Anas_platyrhynchos_platyrhynchos_3_34538422_34539373_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34538422 - 34539373

Intron Length:

952

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

CCTTTGCTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

GGTTACTGGATG

Flanking Amino Acid:

MLQHKDARVKLMTEFLRGIR

Intron Amino Acid Position:

511

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

67.9

37.4

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

72.7

0.51

68.6

37.3

Minor 5ss

24.1

-3

3.3

42.8

Minor BPS

-0.3

1.8

54.06

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003561

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021181

34529670 - 34543299

13630

ENSAPLT00000003667

34529670 - 34541851

12182