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Intron Name: Anas_platyrhynchos_platyrhynchos_3_34540743_34541690_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34540743 - 34541690

Intron Length:

948

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGACAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTGAA

U12 Branch Point Sequence:

CAACTGTGAAGT

Flanking Amino Acid:

AVSACFLGTPRSGSGVPRWP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

69.6

36.5

Major BPS

59.7

0.24

1.2

52.7

43.2

Major PPT

0.74

0.7

74.2

30.9

Minor 5ss

37.4

-1.4

47.2

48.2

Minor BPS

39.4

-0.7

2.2

51.77

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003561

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021181

34529670 - 34543299

13630

ENSAPLT00000003667

34529670 - 34541851

12182