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Intron Name: Anas_platyrhynchos_platyrhynchos_3_34558774_34559892_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
34558774 - 34559892

Intron Length:
1119

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTTTGATCA

5'SS Class:
major

3'SS Sequence:
CTCTGTCTTTCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
AAATAAT

U12 Branch Point Sequence:
TAAATAATAACT

Flanking Amino Acid:
VEMEVESPIQPEGFSSSPAP

Intron Amino Acid Position:
538

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.9
0.49
1.2
65.2
34.9

Major BPS
71.2
0.53
1
70.3
31.9

Major PPT
83.2
0.75
0.8
80.3
31.8

Minor 5ss
40.7
-1
2.7
49.3
46.5

Minor BPS
48.5
-0
1.9
69.35
40.4

Associated Gene:

Gene:
ZNF318

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

34516134 - 34573526
57393