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Intron Name: Anas_platyrhynchos_platyrhynchos_3_34578618_34581899_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34578618 - 34581899

Intron Length:

3282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CCGTGTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAG

U12 Branch Point Sequence:

AGGCGCTGAGCG

Flanking Amino Acid:

AGLLESSSEKVPASAPRRRM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

71.1

34.7

Major BPS

-0.2

1.6

40.4

42.3

Major PPT

0.41

0.9

61.3

35.1

Minor 5ss

26.1

-2.7

3.2

42.6

Minor BPS

40.4

-0.8

41.27

42.6

Associated Gene:

Gene:

FAM98A

Ensembl Gene ID:

ENSAPLG00000012120

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031388

34578562 - 34596422

17861