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Intron Name: Anas_platyrhynchos_platyrhynchos_3_34581980_34584175_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34581980 - 34584175

Intron Length:

2196

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGCGCC

5'SS Class:

major

3'SS Sequence:

TTTTACTTGTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CTTTAATGAACT

Flanking Amino Acid:

SDVLESLEDLGYKGPLLDDG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.57

60.2

39.4

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

81.2

0.7

81.3

Minor 5ss

31.7

-2.1

3.2

41.8

Minor BPS

56.1

0.27

79.51

41.8

Associated Gene:

Gene:

FAM98A

Ensembl Gene ID:

ENSAPLG00000012120

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031388

34578562 - 34596422

17861

ENSAPLT00000012642

34581657 - 34596422

14766