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Intron Name: Anas_platyrhynchos_platyrhynchos_3_34588543_34589917_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34588543 - 34589917

Intron Length:

1375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGATCC

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCCTAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

TGTCTCCTAACA

Flanking Amino Acid:

FQFFSGIEKKLKETLAKVPP

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

0.9

72.3

31.7

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

75.1

0.57

0.9

70.1

35.2

Minor 5ss

40.9

-1

52.6

38.2

Minor BPS

62.5

0.39

1.7

74.44

36.4

Associated Gene:

Gene:

FAM98A

Ensembl Gene ID:

ENSAPLG00000012120

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031388

34578562 - 34596422

17861

ENSAPLT00000012642

34581657 - 34596422

14766