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Intron Name: Anas_platyrhynchos_platyrhynchos_3_34641287_34657744_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

34641287 - 34657744

Intron Length:

16458

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CACTTCTTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAC

U12 Branch Point Sequence:

ACTGTTTACACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.11

0.7

88.7

23.8

Major BPS

72.8

0.57

30.3

Major PPT

78.6

0.64

0.8

76.3

31.9

Minor 5ss

37.2

-1.4

3.3

45.2

Minor BPS

43.8

-0.4

2.1

60.39

44.3

Associated Gene:

Gene:

RASGRP3

Ensembl Gene ID:

ENSAPLG00000012309

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045998

34604240 - 34658203

53964