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Intron Name: Anas_platyrhynchos_platyrhynchos_3_34734703_34735830_R


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
34734703 - 34735830

Intron Length:
1128

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTATGAATG

5'SS Class:
major

3'SS Sequence:
ATTTCTTTTATAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
ATTTCTTTTATA

Flanking Amino Acid:
KLNDQQTKCSDINECNQTPH

Intron Amino Acid Position:
584

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.6
0.63
1
69.9
40.3

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
85.5
0.8
0.7
80.9
30.5

Minor 5ss
43.3
-0.7
2.9
54.6
43.8

Minor BPS
68.2
0.57
1.5
77.18
34.1

Associated Gene:

Gene:
LTBP1

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

34673080 - 34805375
132296

34673080 - 34805375
132296