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Intron Name: Anas_platyrhynchos_platyrhynchos_3_34745605_34748209_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

34745605 - 34748209

Intron Length:

2605

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAACT

5'SS Class:

strong_major

3'SS Sequence:

ATCCCAAATCTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

GACTCCTAAAAG

Flanking Amino Acid:

HCEKCPLPGTAAFKEICPGG

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

87.2

Major BPS

72.7

0.57

72.1

31.1

Major PPT

58.7

0.2

49.2

37.9

Minor 5ss

36.1

-1.6

50.2

45.8

Minor BPS

50.6

-0.1

1.9

54.66

45.8

Associated Gene:

Gene:

LTBP1

Ensembl Gene ID:

ENSAPLG00000012621

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013254

34673080 - 34805375

132296