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Intron Name: Anas_platyrhynchos_platyrhynchos_3_34766472_34772298_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34766472 - 34772298

Intron Length:

5827

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTTCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TAATATGTAATT

Flanking Amino Acid:

NKCQKCPKKPSYHGYSPMME

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

87.3

Major BPS

90.7

1.01

0.7

19.9

Major PPT

90.9

0.92

0.7

89.5

26.5

Minor 5ss

41.1

-1

3.4

62.8

Minor BPS

49.2

0.02

2.1

70.78

40.4

Associated Gene:

Gene:

LTBP1

Ensembl Gene ID:

ENSAPLG00000012621

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034958

34673080 - 34805375

132296

ENSAPLT00000013254

34673080 - 34805375

132296