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Intron Name: Anas_platyrhynchos_platyrhynchos_3_34939292_34942531_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34939292 - 34942531

Intron Length:

3240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TATTATTATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTTATT

Flanking Amino Acid:

LSTAYIRLKQKIKAFRTLQE

Intron Amino Acid Position:

612

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

87.3

26.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.1

0.59

0.9

74.8

39.6

Minor 5ss

40.1

-1.1

2.8

53.2

37.3

Minor BPS

69.2

0.69

1.5

86.8

32.8

Associated Gene:

Gene:

TTC27

Ensembl Gene ID:

ENSAPLG00000013557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014214

34926101 - 35038932

112832