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Intron Name: Anas_platyrhynchos_platyrhynchos_3_34943724_34948988_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34943724 - 34948988

Intron Length:

5265

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCGGGGAA

5'SS Class:

major

3'SS Sequence:

TTTTTCTCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

GTATATGTAATC

Flanking Amino Acid:

ERSVQINPMQLGVWFSLGCA

Intron Amino Acid Position:

562

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.2

0.36

1.4

60.2

40.8

Major BPS

80.4

0.76

80.3

31.8

Major PPT

92.4

0.95

0.6

85.4

29.3

Minor 5ss

22.6

-3.2

3.4

28.5

43.8

Minor BPS

47.5

-0.2

2.1

60.68

38.8

Associated Gene:

Gene:

TTC27

Ensembl Gene ID:

ENSAPLG00000013557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014214

34926101 - 35038932

112832