Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_35036494_35038844_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35036494 - 35038844

Intron Length:

2351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

EWKQGDVSAAESGSLLQLIF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

92.6

0.96

0.7

85.4

34.1

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

TTC27

Ensembl Gene ID:

ENSAPLG00000013557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014214

34926101 - 35038932

112832