Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_35081987_35088131_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

35081987 - 35088131

Intron Length:

6145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATCATT

5'SS Class:

strong_major

3'SS Sequence:

AAAAAAAAAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTTTTTTCAATA

Flanking Amino Acid:

TCVDTYTNRLRSKKDKAKAG

Intron Amino Acid Position:

4202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

83.7

34.8

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

46.2

-0.2

1.1

31.3

38.7

Minor 5ss

45.4

-0.5

2.9

66.6

44.4

Minor BPS

68.8

0.59

1.4

78.75

31.7

Associated Gene:

Gene:

BIRC6

Ensembl Gene ID:

ENSAPLG00000014195

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014881

35067055 - 35226910

159856