Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_35146608_35148533_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35146608 - 35148533

Intron Length:

1926

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGTATT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCACAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

AAACCTTGAACT

Flanking Amino Acid:

CNSSAMAMIIGASGLHLTKH

Intron Amino Acid Position:

2946

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

83.5

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

66.4

0.37

1.1

67.9

37.1

Minor 5ss

40.4

-1.1

3.2

56.3

42.5

Minor BPS

0.39

1.4

71.52

38.5

Associated Gene:

Gene:

BIRC6

Ensembl Gene ID:

ENSAPLG00000014195

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014881

35067055 - 35226910

159856