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Intron Name: Anas_platyrhynchos_platyrhynchos_3_35182754_35183895_R


Intron Information:

Intron Rank:
20

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
35182754 - 35183895

Intron Length:
1142

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GTG|GTACGTATA

5'SS Class:
strong_major

3'SS Sequence:
TGTTTTAATGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTCACCTGAAAT

Flanking Amino Acid:
MPLLPAAATGGSVYWYFVLL

Intron Amino Acid Position:
1383

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.4
0.74
1
80
34.8

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
79.5
0.66
1
74.8
38.9

Minor 5ss
38.4
-1.3
3
47.8
43.1

Minor BPS
63.2
0.49
1.6
79.38
42

Associated Gene:

Gene:
BIRC6

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

35067055 - 35226910
159856