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Intron Name: Anas_platyrhynchos_platyrhynchos_3_35223192_35226838_R


Intron Information:

Intron Rank:
1

Intron Class:
major-like

Intron Phase:
0

Intron Coordinates:
35223192 - 35226838

Intron Length:
3647

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGCAGGAG

5'SS Class:
major

3'SS Sequence:
ACAAATATTATAG|G

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
AACAAAT

U12 Branch Point Sequence:
CTTTCCAGAACA

Flanking Amino Acid:
YGALLKFALKVSYKSCFLIR

Intron Amino Acid Position:
25

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
65.1
0.36
1.1
53.5
39.5

Major BPS
60.7
0.27
1
65.3
28.1

Major PPT
59.7
0.22
1
51.3
41.6

Minor 5ss
21.4
-3.3
3.4
27.8
44.2

Minor BPS
63.8
0.43
1.8
77.55
38.9

Associated Gene:

Gene:
BIRC6

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

35067055 - 35226910
159856