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Intron Name: Anas_platyrhynchos_platyrhynchos_3_35246503_35248722_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35246503 - 35248722

Intron Length:

2220

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTAGAA

U12 Branch Point Sequence:

TTCTCTTTTAAG

Flanking Amino Acid:

SMISLYGQFKVVSWIITIWI

Intron Amino Acid Position:

137

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.9

87.1

Major BPS

61.2

0.28

58.8

38.1

Major PPT

82.1

0.72

0.9

24.1

Minor 5ss

37.9

-1.4

3.1

50.4

46.1

Minor BPS

55.8

0.04

1.9

64.24

43.6

Associated Gene:

Gene:

YIPF4

Ensembl Gene ID:

ENSAPLG00000007556

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031924

35243573 - 35254470

10898

ENSAPLT00000007850

35242996 - 35254470

11475