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Intron Name: Anas_platyrhynchos_platyrhynchos_3_35305820_35309406_R

Intron Information:

Intron Rank:

138602

Intron Class:

major

Intron Phase:

Intron Coordinates:

35305820 - 35309406

Intron Length:

3587

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TATATAGTGAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

1.1

74.6

37.4

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

84.7

0.78

0.8

76.9

37.3

Minor 5ss

30.3

-2.3

2.9

36.8

40.3

Minor BPS

40.2

-0.6

2.4

61.21

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022058

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033445

35299461 - 35320609

21149