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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_35392835_35394382_F

Intron Information:

Intron Rank:
143942
Intron Class:
major
Intron Phase:
Intron Coordinates:
35392835 - 35394382
Intron Length:
1548

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TAG|GTAATTTAA
5'SS Class:
strong_major
3'SS Sequence:
GTTGTATTTCTAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTCAT
U12 Branch Point Sequence:
ACTTTTTTCATT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
86.8
0.87
0.9
82.1
25.8
Major BPS
100
1.24
0.5
100
0
Major PPT
75.4
0.57
0.9
66.7
44.2
Minor 5ss
39.6
-1.2
2.8
49.5
46.6
Minor BPS
56.7
0.29
1.7
72.81
39.3

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000027584
Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000041988
35391857 - 35403726
11870
ENSAPLT00000036269
35391857 - 35396406
4550