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Intron Name: Anas_platyrhynchos_platyrhynchos_3_35563505_35563626_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
35563505 - 35563626

Intron Length:
122

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTATTACCC

5'SS Class:
major

3'SS Sequence:
CTGTCGGTTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTGCCAC

U12 Branch Point Sequence:
CCGGGTGCCACG

Flanking Amino Acid:
AAAGRRAIEEVVKALRCRHR

Intron Amino Acid Position:
31

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.5
0.48
1.1
58
39.3

Major BPS
43.9
-0.3
1.4
49.9
45.3

Major PPT
71.9
0.49
1
64.8
41.3

Minor 5ss
39.4
-1.2
3
52.5
44.2

Minor BPS
25.9
-2
2.2
21.43
37.3

Associated Gene:

Gene:
NANP

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

35562809 - 35563716
908