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Intron Name: Anas_platyrhynchos_platyrhynchos_3_35603451_35604338_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35603451 - 35604338

Intron Length:

888

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGTA

5'SS Class:

strong_major

3'SS Sequence:

GCTTATTCCATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

GTGGAATTAACT

Flanking Amino Acid:

YCIWCGTTYEDSEDLSSNCP

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

80.3

26.9

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

70.8

0.47

0.9

36.1

Minor 5ss

28.6

-2.5

3.4

37.8

Minor BPS

51.6

0.13

1.9

71.1

45.1

Associated Gene:

Gene:

GPATCH11

Ensembl Gene ID:

ENSAPLG00000009863

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018504

35603395 - 35610285

6891

ENSAPLT00000010277

35603395 - 35608666

5272