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Intron Name: Anas_platyrhynchos_platyrhynchos_3_35606268_35606346_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

35606268 - 35606346

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTGAT

5'SS Class:

major

3'SS Sequence:

TAAACTTACAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATGTTTTAAACT

Flanking Amino Acid:

VEPIPLNIKTGRSGLGHEEF

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

75.2

34.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

52.8

0.06

1.1

52.6

40.4

Minor 5ss

36.8

-1.5

3.1

49.5

46.8

Minor BPS

62.4

0.47

1.6

77.17

Associated Gene:

Gene:

GPATCH11

Ensembl Gene ID:

ENSAPLG00000009863

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018504

35603395 - 35610285

6891

ENSAPLT00000010277

35603395 - 35608666

5272