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Intron Name: Anas_platyrhynchos_platyrhynchos_3_35743198_35743934_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35743198 - 35743934

Intron Length:

737

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTATCTGCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTCTTTTTATCT

Flanking Amino Acid:

MGIVQYGDDPSTEFNL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

71.1

37.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

75.4

0.57

70.4

40.9

Minor 5ss

31.4

-2.1

3.6

39.6

45.9

Minor BPS

67.7

0.63

1.6

82.72

39.3

Associated Gene:

Gene:

VIT

Ensembl Gene ID:

ENSAPLG00000011837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012351

35739233 - 35743954

4722