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Intron Name: Anas_platyrhynchos_platyrhynchos_3_36427634_36439592_F

Intron Information:

Intron Rank:

150410

Intron Class:

major

Intron Phase:

Intron Coordinates:

36427634 - 36439592

Intron Length:

11959

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TGATCTGTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

29.3

Major BPS

84.6

0.86

41.2

Major PPT

87.3

0.84

0.7

82.2

Minor 5ss

41.9

-0.9

2.9

58.7

45.8

Minor BPS

59.1

0.36

77.22

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030842

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041789

36427131 - 36445296

18166

ENSAPLT00000029362

36418321 - 36445296

26976

ENSAPLT00000024355

36423710 - 36445296

21587