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Intron Name: Anas_platyrhynchos_platyrhynchos_3_36439729_36442484_F

Intron Information:

Intron Rank:

150411

Intron Class:

major

Intron Phase:

Intron Coordinates:

36439729 - 36442484

Intron Length:

2756

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTCCA

5'SS Class:

major

3'SS Sequence:

TTCTGCCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

TATTCCACACAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

65.7

40.1

Major BPS

68.1

0.45

58.1

38.5

Major PPT

0.74

0.8

76.3

32.4

Minor 5ss

36.7

-1.5

2.9

48.4

41.1

Minor BPS

46.9

-0.1

2.1

72.28

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030842

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041789

36427131 - 36445296

18166

ENSAPLT00000030903

36427131 - 36445296

18166

ENSAPLT00000029362

36418321 - 36445296

26976

ENSAPLT00000024355

36423710 - 36445296

21587