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Intron Name: Anas_platyrhynchos_platyrhynchos_3_36479770_36488464_R

Intron Information:

Intron Rank:

138890

Intron Class:

major

Intron Phase:

Intron Coordinates:

36479770 - 36488464

Intron Length:

8695

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATGT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCCACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAC

U12 Branch Point Sequence:

CTGGCAGTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

74.9

36.1

Major BPS

54.4

0.11

1.2

36.4

Major PPT

70.1

0.45

0.9

61.9

33.8

Minor 5ss

-1.2

3.2

56.6

47.5

Minor BPS

45.8

-0.3

2.3

59.8

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022214

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019958

36473952 - 36488560

14609