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Intron Name: Anas_platyrhynchos_platyrhynchos_3_3659124_3660074_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3659124 - 3660074

Intron Length:

951

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGACTT

5'SS Class:

major

3'SS Sequence:

CTTCTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

TGTCTTAGAACA

Flanking Amino Acid:

VAGWKSPSSIMMHGMAGLFH

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

73.6

36.9

Major BPS

0.6

65.6

41.1

Major PPT

88.5

0.87

0.6

88.2

21.6

Minor 5ss

34.9

-1.7

3.4

43.9

Minor BPS

48.4

-0.1

1.7

63.34

36.2

Associated Gene:

Gene:

TMX4

Ensembl Gene ID:

ENSAPLG00000012866

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013391

3649411 - 3665997

16587