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Intron Name: Anas_platyrhynchos_platyrhynchos_3_3660121_3662306_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3660121 - 3662306

Intron Length:

2186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCATTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

ATTTGATAAATA

Flanking Amino Acid:

GLFHFSGWIRQIHSYLTGTL

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

81.4

32.7

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

85.3

0.79

0.8

77.2

Minor 5ss

35.6

-1.6

2.7

37.5

40.1

Minor BPS

47.7

-0.1

2.2

66.61

40.2

Associated Gene:

Gene:

TMX4

Ensembl Gene ID:

ENSAPLG00000012866

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013391

3649411 - 3665997

16587