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Intron Name: Anas_platyrhynchos_platyrhynchos_3_36674947_36677491_F

Intron Information:

Intron Rank:

130144

Intron Class:

major

Intron Phase:

Intron Coordinates:

36674947 - 36677491

Intron Length:

2545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATCCGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTCTTTTTATCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

71.2

34.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

85.9

0.81

0.7

81.8

28.9

Minor 5ss

28.3

-2.5

3.1

31.3

36.6

Minor BPS

57.6

0.22

1.6

64.74

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020018

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043283

36668771 - 36678511

9741