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Intron Name: Anas_platyrhynchos_platyrhynchos_3_36874336_36885206_R

Intron Information:

Intron Rank:

139222

Intron Class:

major

Intron Phase:

Intron Coordinates:

36874336 - 36885206

Intron Length:

10871

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAAATAG

5'SS Class:

major

3'SS Sequence:

TCTTTTTTATTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAA

U12 Branch Point Sequence:

TCTTTTTTATTA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.64

0.9

67.1

34.5

Major BPS

72.6

0.56

1.2

75.9

36.3

Major PPT

83.9

0.76

0.8

85.7

27.3

Minor 5ss

31.2

-2.2

3.1

37.5

47.2

Minor BPS

61.6

0.36

1.5

69.82

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022357

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032810

36873109 - 36885475

12367