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Intron Name: Anas_platyrhynchos_platyrhynchos_3_3695229_3698123_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3695229 - 3698123

Intron Length:

2895

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TTCACTCTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

CCTGGTTTCACT

Flanking Amino Acid:

ARQLDGVPATIDVLPEIVEA

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

77.8

36.6

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

77.6

0.62

0.8

69.8

36.5

Minor 5ss

41.3

-1

2.8

62.9

Minor BPS

45.3

-0.2

2.2

62.23

48.4

Associated Gene:

Gene:

HAO1

Ensembl Gene ID:

ENSAPLG00000012530

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013058

3671655 - 3699086

27432