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Intron Name: Anas_platyrhynchos_platyrhynchos_3_37209056_37214664_R


Intron Information:

Intron Rank:
16

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
37209056 - 37214664

Intron Length:
5609

Sequence Information:

Terminal Dinucleotides:
GC-AG

5'SS Sequence:
AAG|GCAAGAAAT

5'SS Class:
strong_major

3'SS Sequence:
TTTCTTGGTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
GGTTTTTTATTT

Flanking Amino Acid:
RHKGLKKKYKGANWLIQILN

Intron Amino Acid Position:
1009

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
93.6
1.03
0.9
82.8
36.4

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
79.6
0.67
1
72.8
42.2

Minor 5ss
24.8
-2.9
3.8
39.4
46.1

Minor BPS
58.7
0.35
1.5
72.6
38.9

Associated Gene:

Gene:
CEBPZ

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

37205229 - 37230533
25305