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Intron Name: Anas_platyrhynchos_platyrhynchos_3_37219512_37220621_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
37219512 - 37220621

Intron Length:
1110

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAATGAAA

5'SS Class:
strong_major

3'SS Sequence:
TATGTTATTTCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATGTTAT

U12 Branch Point Sequence:
ATTATGTTATTT

Flanking Amino Acid:
KIPVDEVFFHRFYTKMDNKR

Intron Amino Acid Position:
768

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.3
0.74
1
76.8
33.4

Major BPS
72.5
0.56
1.2
63.4
44

Major PPT
81.4
0.71
0.9
78.3
39.6

Minor 5ss
31.6
-2.1
3.1
39.6
45.9

Minor BPS
47.2
-0.1
2.2
70.29
41.3

Associated Gene:

Gene:
CEBPZ

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

37205229 - 37230533
25305