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Intron Name: Anas_platyrhynchos_platyrhynchos_3_37225886_37226907_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
37225886 - 37226907

Intron Length:
1022

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAATCAG

5'SS Class:
strong_major

3'SS Sequence:
TATACCCCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTCAT

U12 Branch Point Sequence:
CTTTTTTCATCT

Flanking Amino Acid:
ASWVHHVNMRGRKNGVSYDP

Intron Amino Acid Position:
641

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.2
0.81
0.9
71.2
40.6

Major BPS
100
1.24
0.5
100
0

Major PPT
69.3
0.43
0.9
59.2
37.7

Minor 5ss
32.9
-1.9
3
40.4
45.7

Minor BPS
54.1
0.21
1.8
75.13
42.3

Associated Gene:

Gene:
CEBPZ

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

37205229 - 37230533
25305