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Intron Name: Anas_platyrhynchos_platyrhynchos_3_37240257_37240719_R


Intron Information:

Intron Rank:
14

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
37240257 - 37240719

Intron Length:
463

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTTGGTATT

5'SS Class:
major

3'SS Sequence:
CTCCTTTTTAAAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTGAA

U12 Branch Point Sequence:
TCCTTTTTAAAG

Flanking Amino Acid:
ERITKFMVTQILVALRNLHF

Intron Amino Acid Position:
683

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.7
0.65
1.2
83
36.1

Major BPS
87.2
0.92
0.8
77.7
37.1

Major PPT
76
0.58
1
77.1
29

Minor 5ss
36.6
-1.5
3.1
51.4
45.2

Minor BPS
59.5
0.16
1.5
59.29
43.1

Associated Gene:

Gene:
PRKD3

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

37236845 - 37272728
35884