Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_37241554_37244454_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37241554 - 37244454

Intron Length:

2901

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATTAT

5'SS Class:

strong_major

3'SS Sequence:

ACTTTCTGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CTGACATTGACT

Flanking Amino Acid:

GSGQFGIVYGGKHRKTGRDV

Intron Amino Acid Position:

593

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

86.4

23.9

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

79.2

0.66

0.9

77.2

36.4

Minor 5ss

41.2

-1

57.8

46.8

Minor BPS

57.5

0.32

1.7

73.13

43.7

Associated Gene:

Gene:

PRKD3

Ensembl Gene ID:

ENSAPLG00000014444

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015127

37236845 - 37272728

35884