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Intron Name: Anas_platyrhynchos_platyrhynchos_3_37289505_37290381_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37289505 - 37290381

Intron Length:

877

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TCTGTATTAAAG

Flanking Amino Acid:

STTTNQLQGMDLLVLLDLIG

Intron Amino Acid Position:

439

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

34.9

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

82.2

0.72

0.7

77.6

24.3

Minor 5ss

34.1

-1.8

3.1

41.9

38.9

Minor BPS

49.1

-0.2

1.9

57.05

44.4

Associated Gene:

Gene:

QPCT

Ensembl Gene ID:

ENSAPLG00000014830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015458

37279300 - 37293530

14231