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Intron Name: Anas_platyrhynchos_platyrhynchos_3_37318635_37319701_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37318635 - 37319701

Intron Length:

1067

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGCTAT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTCTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

CACTTGTGACCT

Flanking Amino Acid:

EQVKNMSASEMRNIKLSDFT

Intron Amino Acid Position:

577

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

75.1

37.7

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

82.9

0.74

0.7

81.2

30.9

Minor 5ss

44.4

-0.6

3.2

64.2

47.3

Minor BPS

41.5

-0.5

2.3

56.77

45.9

Associated Gene:

Gene:

SPAST

Ensembl Gene ID:

ENSAPLG00000015351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016105

37318512 - 37350876

32365