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Intron Name: Anas_platyrhynchos_platyrhynchos_3_37340806_37345808_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37340806 - 37345808

Intron Length:

5003

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTACCAGTT

5'SS Class:

major

3'SS Sequence:

GTCTGTTATGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTTAT

U12 Branch Point Sequence:

TGTCTGTTATGT

Flanking Amino Acid:

AMAKDRLQLLEKLQADLQIS

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.2

40.8

Major BPS

0.47

1.2

61.1

45.5

Major PPT

70.8

0.47

65.9

Minor 5ss

40.8

-1

3.7

64.9

46.4

Minor BPS

43.3

-0.4

2.4

65.38

45.1

Associated Gene:

Gene:

SPAST

Ensembl Gene ID:

ENSAPLG00000015351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016105

37318512 - 37350876

32365