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Intron Name: Anas_platyrhynchos_platyrhynchos_3_37379616_37382174_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37379616 - 37382174

Intron Length:

2559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCTGG

5'SS Class:

major

3'SS Sequence:

TGTCTCTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTCTCTTCACA

Flanking Amino Acid:

MKYLQEQEAAGPQLNAQLEG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

60.6

46.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.4

0.71

0.8

75.9

32.7

Minor 5ss

41.9

-0.9

3.2

55.4

48.8

Minor BPS

61.8

0.36

1.8

73.25

38.4

Associated Gene:

Gene:

MEMO1

Ensembl Gene ID:

ENSAPLG00000005693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042302

37379543 - 37396859

17317

ENSAPLT00000017359

37379156 - 37397023

17868